Statistical Genetics and Bioinformatics Reading Group
Fall 2016

Time: Tuesday 3:00 PM - 3:55 PM
Place: Dulles 020

For further information about this semester's reading group, please contact Shili Lin.

• Tuesday August 30:
  All members
  Topic: Organizational meeting
  
  
  
• Tuesday September 13
  Discussion Leader: Chi Song
  Oscope identifies oscillatory genes in unsynchronized single-cell RNA-seq experiments
  by Leng et al. Nature Methods 2015 12(10):947-950.
  
  
• Tuesday September 27 :
  Discussion Leader: Meng Wang
  Single Cell Genomics: Advances and Future Perspectives
  by Iain C. Macaulay1 and Thierry Voet. PLoS Genetics January 2014 Volume 10 Issue 1 e1004126
  
  
• Tuesday October 11:
  Discussion Leader: Xiaofei Zhou
  Single-cell genome-wide bisulfite sequencing for assessing epigenetic heterogeneity
  by Smallwood SA, LeeHJ, Angermueller C, KruegerF,Saadeh H, Peat J, AndrewsSR, Stegle O, ReikW, Kelsey. Nature Methods 11(8):817-820, 2014
  
  
• Tuesday November 1:
  Discussion Leader: Asuman Turkmen
  Single-cell genome-wide bisulfite sequencing uncovers extensive heterogeneity in the mouse liver methylome
  Additional File 1
  by Gravina, Silvia; Dong, Xiao; Yu, Bo; et al. GENOME BIOLOGY Volume: 17 Article Number: 150
  
  
• Tuesday November 22:
  Discussion Leader: Shili Lin
  Single-cell Hi-C reveals cell-to-cell variability in chromosome structure
  Supplementary information
  Link to videos showing individual cell structure
  by Nagano T, Lubling Y,Stevens TJ, Schoenfelder S, Yaffe E, Dean W, Laue ED, Tanay A, Fraser P. Nature 502(7469):59–64, 2013.
  
  
• Tuesday December 6
  Discussion Leader: Lo-Bin Chang
  Single-cell epigenomics: powerful new methods for understanding gene regulation and cell identity
  by Clark, Stephen J, Lee, Heather J, Smallwood, Sebastien A, et al. GENOME BIOLOGY Volume: 17 Article Number: 72