Statistical Genetics Journal Club
Winter 2011

Time: Tuesdays 4:00-5:00pm or Wednesdays 5:00-6:00pm
Place: Cockins Hall 212

• Tuesday, January 18:
  Dao-Peng Chen (Dept of Stat)
  Transcriptome-Wide Identification of Novel Imprinted Genes in Neonatal Mouse Brain
  Xu Wang et al
  PLoS One 2008,3:e3839
  Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
  C Trapnell et al
  Nature Biotechnology,Volume 28,511-515(2010)
  
  
• Wednesday January 26:
  Liang Niu (Dept of Stat)
  Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome
  Erez Lieberman-Aiden, et al.
  Science 326, 289 (2009)
  Supplement Material
  
  
• Wednesday, February 9:
  Katie Thompson (Dept of Stat)
  LSOSS: Detection of Cancer Outlier Differential Gene Expression
  Yupeng Wang and Romdhane Rekaya
  Biomarker Insights 5: 69-78(2010)
  
  
• Wednesday, February 16:
  Prof. Shili Lin (Dept of Stat)
  Investigation of Maternal Effects, Maternal-Fetal Interactions and Parent-of-Origin Effects (Imprinting), Using Mothers and Their Offspring
  Holly F. Ainsworth et al.
  Genetic Epidemiology 35: 19-45 (2011)
  
  
• Tuesday, February 22:
  Prof. Asuman Turkmen (Dept of Stat)
  Sparse Partial Least Squares Classification for High Dimensional Data
  Chung, Dongjun and Keles, Sunduz
  Statistical Applications in Genetics and Molecular Biology: Vol. 9 : Iss. 1, Article 17. (2010)
  
  
• Wednesday, February 23:
  Meng Wang (Dept of Stat)
  Evaluating Haplotype Effects in Case-Control Studies via Penalized-Likelihood Approaches: Prospective or Retrospective Analysis?
  Megan L. Koehler, et al.
  Genetic Epidemiology 34 : 892-911 (2010)
  
  
• Wednesday, March 2:
  Lynn Friedman (Dept of Stat)
  Phase Coupled Meta-analysis: sensitive detection of oscillations in cell cycle gene expression, as applied to fission yeast
  Saumyadipta Pyne, et al.
  BMC Genomics 2009, 10:440
  
  
• Tuesday, March 8:
  Cenny Taslim (Dept of Stat)
  A negative binomial model for time series of counts
  Richard Davis and Rongning Wu
  Biometrika 96, 3: 735–749 (2009)