Statistical Genetics and Bioinformatics Reading Group
Spring 2020
Time: Thursdays 4:10-5:05 PM
Place: Cockins 228
Information on reading materials will be updated as they become available.
For further information about this semester's reading group, please contact
Shili Lin.
- Thursday January 16, 2020
Discussion Leader: Zilu Liu
Efficient Variant Set Mixed Model Association
Tests for Continuous and Binary Traits
in Large-Scale Whole-Genome Sequencing Studies.
by Chen et al., The American Journal of Human Genetics 104, 260–274, February 7, 2019.
- Thursday January 23, 2020
Discussion Leader: Pei Yang
(cancelled)
Increasing the power of meta-analysis of
genome-wide association studies to
detect heterogeneous effects
by Lee et al., Bioinformatics, 33, 2017, i379–i388.
- Thursday January 30, 2020
Discussion Leader: Qing Xie
SCL: a lattice-based approach to infer 3D
chromosome structures from single-cell
Hi-C data
by Zhu and Wang, Bioinformatics, 35(20), 2019, 3981–3988.
- Thursday February 13, 2020
Discussion Leader: Cheng Cao
A Method of Moments Estimator for Random Effect Multivariate
Meta-Analysis
by Chen et al. Biometrics. 2012 December ; 68(4): 1278-1284.
- Thursday February 20, 2020
Discussion Leader: Shuyuan Lou
CRNET: an efficient sampling approach to infer
functional regulatory networks by integrating
large-scale ChIP-seq and time-course RNA-seq
data.
Supplementary folder
by Chen et al.Bioinformatics, 34(10), 2018, 1733–1740.
- Thursday March 5, 2020
Discussion Leader: Yiwen Wang
Integrative Approaches for Large-scale Transcriptome-wide Association Studies
by Alexander Gusev et.al. Nature Genetic 2016; 48(3): 245-252.
- Tuesday March 24, 2020
Discussion Leader: Chenggong Han
Revealing Hi-C subcompartments by imputing
inter-chromosomal chromatin interactions
by Xiong and Ma
- Thursday April 2, 2020
Discussion Leader: Asuman Turkmen
ACAT: A Fast and Powerful p Value Combination Method
for Rare-Variant Analysis in Sequencing Studies
by Liu et al.
- Thursday April 9, 2020
Discussion Leader: Meng Wang
BRIE: transcriptome-wide splicing
quantification in single cells
by Huang and Sanguinetti
|
|
