Statistical Genetics Journal Club
Spring 2013
Time: Friday 3:30 - 4:25 PM
Place: Cockins Hall 212
For further information about this semester's journal club, please contact
Shili Lin or
Fangyuan Zhang.
- Friday 1/18:
Speaker:
Xiangtao Liu
Topic:
How to use OSC facility
- Friday January 25:
Speaker:
Fangyuan Zhang
Topic:
The Silence of Genes
Philip Hunter
EMBO Rep. 2007 May; 8(5):441-443
- Friday February 1:
Speaker:
Shuang Xia
Topic: Detecting Gene-Environment Interaction using Logistic Bayesian Lasso and using B-Splines and LBL for Longitudinal Data.
The Role of Haplotypes in Candidate Gene Studies
Andrew G.Clark
Genetic Epidemiology 27: 321-333 (2004)
- Friday February 8:
Speaker:
William Stewart
Topic:
Simple Association Analysis Combining Data From Trios/Sibships and Unrelated Controls.
Chen YH, Lin HW
Genetic epidemiology 2008, 32(6):520-527
- Friday February 15:
Speaker:
Will Ray
Topic:
The Plane with Parallel Coordinates.
Alfred Inselberg
The Visual Computer (1985) 1:69-91
Conditional Random Fields: Probabilistic Models for Segmenting and Labeling Sequence Data.
John Lafferty, Andrew McCallum, Fernando Pereira
Proceedings of the 18th International Conference on Machine Learning 2001 (ICML 2001):282-289
- Friday February 22:
Speaker:
Meng Wang
Topic:
Haplotype-Based Methods for Detecting Uncommon Causal Variants With Common SNPs.
Wan-Yu Lin, Nengjun Yi, Degui Zhi, Kui Zhang, Guimin Gao, Hemant K. Tiwari, and Nianjun Liu.
Genetic Epidemiology 36 : 572-582 (2012)
- Friday March 1:
Speaker:
Xiangtao Liu
Topic:
A Probabilistic Method for Identifying Rare Variants Underlying Complex Traits.
Jiayin Wang, Zhongmeng Zhao, Zhi Cao, Aiyuan Yang, Jin Zhang.
BMC Genomics 2013, 14(Suppl 1):S11
- Friday March 8:
Speaker:
Lynn Friedman
Topic:
Heterogeneity in Meta-Analyses of Genome-Wide Association Investigations.
John P. A. Ioannidis, Nikolaos A. Patsopoulos, Evangelos Evangelou.
PLoS ONE 2007 2(9): e841
Undue Reliance on I2 in Assessing Heterogeneity May Mislead.
Gerta Rücker, Guido Schwarzer, James R Carpenter and Martin Schumacher.
BMC Medical Research Methodology 2008, 8:79
- Friday March 22:
Speaker:
Shuang Xia
Topic:
Rare Variant Analysis for Family-Based Design.
Gourab De, Wai-Ki Yip, Iuliana Ionita-Laza, Nan Laird
PLoS ONE 2013, 8(1): e48495
- Friday March 29:
Speaker:
Fangyuan Zhang
Topic:
Detecting Maternal-Effect Loci by Statistical Cross-Fostering.
Jason Wolf and James M. Cheverud
Genetics, 2012,Vol. 191, 261-277
- Friday April 5:
Speaker:
Asuman Turkmen
Topic:
Adjustment for Population Stratification via Principal Components in Association Analysis of Rare Variants.
Y Zhang, W Guan, W Pan
Genetic epidemiology, 2013 Jan; 37(1): 99-109
- Friday April 12:
Speaker:
Jincheol Park
Topic: Random Effect Models for inference on 3D Architecture of Chromatin
Related paper:
Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome
Erez Lieberman-Aiden,Nynke L. van Berkum, Louise Williams, Maxim Imakaev,Tobias Ragoczy et al.
SCIENCE 2009 VOL 326
- Friday April 19:
Speaker:
Shili Lin
Topic:
Dirichlet Multinomial Mixtures: Generative Models for
Microbial Metagenomics.
Ian Holmes, Keith Harris, Christopher Quince
PLoS ONE 2012, 7(2): e30126
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