Statistical Genetics and Bioinformatics Reading Group
Autumn 2023

Time: Fridays 4:00-5:00 PM; Place: CH312

For further information about this semester's reading group, please contact Shili Lin.

• Friday, September 15, 2023
  Discussion Leader: Meng Wang
  A statistician's guid to sequencing
  by Meng Wang (slides)
  
  
• Friday, September 22, 2023
  Discussion Leader: Shili Lin
  Some introduction materials
  by Shili Lin (slides)
  
  
• Friday, September 29, 2023
  Discussion Leader: Asuman Turkmen
  Control for population stratification in genetic association studies based on GWAS summary statistics
  by Yang et al. Genetic Epidemiology, 2022;46:604-614.
  
  
• Friday, October 6, 2023
  Discussion Leader: Yongqi Liu
  Single-cell Hi-C data analysis: safety in numbers
  by Galitsyna et al. Briefings in Bioinformatics, 22(6), 2021, 1–13.
  
  
• Friday, October 20, 2023
  Discussion Leader: Qingyu Chen
  Zero-inflated generalized Dirichlet multinomial regression model for microbiome compositional data analysis
  by Tang and Chen; Biometrics, 2019, 20:698-713.
  
  
• Friday, November 3, 2023
  Discussion Leaders: Emerson Webb
  Matrix prior for data transfer between single cell data types in latent Dirichlet allocation
  by Min et al. PLOS COMPUTATIONAL BIOLOGY, 2022, 19(5): e1011049.
  
  
• Friday, November 17, 2023
  Discussion Leaders: Torey Hilbert
  Cooperative learning for multiview analysis
  by Ding et al. PNAS 2022 Vol. 119 No. 38 e2202113119.
  Semi-supervised Cooperative Learning for Multiomics Data Fusion
  by Ding et al. arXiv:2308.01458v1 (2023)
  
  
• Friday, December 1, 2023
  Discussion Leaders: Sally Paganin
  CO-CLUSTERING OF SPATIALLY RESOLVED TRANSCRIPTOMIC DATA
  Supplementary document
  by SOTTOSANTI and RISSO, AOAS, 17,1444-1468, 2023.