Statistical Genetics and Bioinformatics Reading Group
Autumn 2023

Time: Fridays 4:00-5:00 PM; Place: CH212

For further information about this semester's reading group, please contact Shili Lin.

• Friday, January 1/19, 2023
  Discussion Leader: All
  Group meeting to discuss reading topics
  
  
  
• Friday, February 2, 2024
  Discussion Leader: Torey Hilbert
  BAYESIANINDICATORVARIABLESELECTIONTO INCORPORATEHIERARCHICALOVERLAPPINGGROUP STRUCTUREINMULTI-OMICSAPPLICATIONS
  by Zhu et al. AOAS 2019, 13:2611–2636.
  
  
• Friday, February 9, 2024
  Discussion Leader: Emerson Webb
  Integrating single-cell transcriptomic data across different conditions, technologies, and species
  by Butler et al. Nature Biotechnology (2018) 36:411-425.
  
  
• Friday, February 16, 2024
  Discussion Leader: Sally Paganin
  A fully Bayesian latent variable model for integrative clustering analysis of multi-type omics data
  by Mo et al. Biostatistics (2018) 19:71–86.
  
  
• Friday, February 23, 2024
  Discussion Leader: Yongqi Liu
  A fast scalable and versatile tool for analysis of single-cell omics data
  by Zhang et al. Nature Methods (2024) 21:217–227
  
  
• Friday, March 1
  Discussion Leader: Asu Turkmen
  Integration strategies of multi-omics data for machine learning analysis
  by Picard et al. Computational and Structural Biotechnology Journal 19 (2021) 3735–3747.
  
  
• Friday, March 22, 2024
  Discussion Leaders: Max Cartwright
  Multi-Omics Factor Analysis—a framework for unsupervised integration of multi-omics data sets
  by Argelaguet et al. Molecular Systems Biology 14: e8124 (2018).
  
  
• Friday, April 5, 2024
  Discussion Leaders: Sang Wan Lee
  Integrative analysis of multi-omics and imaging data with incorporation of biological information via structural Bayesian factor analysis
  Bao et al. Briefings in Bioinformatics, 2023, 24(2), 1–15.
  
  
• Friday, Spril 12, 2024
  Discussion Leaders: Dan Kinnamon
  Selecting likely causal risk factors from highthroughput experiments using multivariable Mendelian randomization
  by Zuber et al. NATURE COMMUNICATIONS (2020) 11:29
  
  
• Friday, April 19, 2024
  Discussion Leaders: Shili Lin