LBL

 Bullet PURPOSE: R package that performs Logistic Bayesian Lasso for finding association of SNP haplotypes and environmental factors with a trait in a case-control setting. Bayesian lasso is used to find the posterior distributions of logistic regression coefficients, which are then used to calculate Bayes Factor to test for association. The new version LBLGXE expands on the original LBL and is the recommended package to download. However, you may still use the original LBL if your data do not contain covariates.

The LBLGXE package may be downloaded from the links below

 Bullet LBLGXE (For running on Linux; in a zipped, tar file; compiled with R 3.0)

 Bullet LBLGXE (Compiled R package file for Windows in a zipped file)

 Bullet Brief Instructions for installing and runing LBLGXE. Complete manual

The original LBL package may be downloaded from the links below

 Bullet LBL (For running on Linux; in a zipped, tar file; compiled with R 2.15)

 Bullet Brief Instructions for installing and runing LBL.

The famLBL package may be downloaded from teh link below.

 Bullet famLBL (For running on Linux; in a zipped, tar file; compiled with R 3.0)

 Bullet Brief Instructions for installing and runing famLBL. Complete Manual

 Bullet References:

 Bullet If you have any questions, please email Shuang Xia at xia.64@osu.edu, Swati Biswas at Swati.Biswas@unthsc.edu, Meng Wang at wang.1357@osu.edu, or Shili Lin at shili@stat.osu.edu