LBL

 Bullet PURPOSE: R package that performs Logistic Bayesian Lasso for finding association of haplotypes and environmental factors with a trait in a case-control or family setting. Bayesian lasso is used to find the posterior distributions of logistic regression coefficients, which are then used to calculate Bayes Factor to test for association. Credible intervals are also constructed from the posterior sample. LBLGXE Version 1.3 can now handle complex sampling design. However, the older versions are still kept in case they are needed.

The LBLGXE package may be downloaded from the links below

 Bullet LBLGXE (Version 1.3 for running on Linux; in a zipped, tar file; compiled with R 3.0 and based on a faster algorithm)

 Bullet LBLGXE (Version 1.1 for running on Linux; in a zipped, tar file; compiled with R 3.0 and based on a faster algorithm)

 Bullet LBLGXE (Version 1.0 for running on Linux; in a zipped, tar file; compiled with R 3.0)

 Bullet LBLGXE (Version 1.3; compiled R package file for Windows in a zipped file, based on a faster algorithm)

 Bullet LBLGXE (Version 1.1; compiled R package file for Windows in a zipped file, based on a faster algorithm)

 Bullet LBLGXE (Version 1.0; compiled R package file for Windows in a zipped file)

 Bullet Brief Instructions for installing and runing LBLGXE. Complete manual

The original LBL package may be downloaded from the links below

 Bullet LBL (For running on Linux; in a zipped, tar file; compiled with R 2.15)

 Bullet Brief Instructions for installing and runing LBL.

The famLBL package may be downloaded from the link below.

 Bullet famLBL (For running on Linux; in a zipped, tar file; compiled with R 3.0)

 Bullet Brief Instructions for installing and runing famLBL.

 Bullet References:

 Bullet If you have any questions, please email Shuang Xia at xia.64@osu.edu, Swati Biswas at Swati.Biswas@unthsc.edu, Meng Wang at wang.1357@osu.edu, or Shili Lin at shili@stat.osu.edu