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Department of Statistics, The Ohio State University
Statistics and Biostatistics Colloquium Series
Approximate Bayesian Computation in Population Genetics
Mark Beaumont
School of Animal and Microbial Sciences, University of Reading, UK
3:30PM - Thursday, October 16, 2008
Room 170, Eighteenth Avenue Bldg. (EA 170)
ABSTRACT
Recently a group of techniques, variously called likelihood-free
inference, or Approximate Bayesian Computation (ABC), have been quite
widely applied in population genetics. These methods typically require
the data to be compressed into summary statistics. A large number of
simulations are then performed. The main idea is that an approximation of
the likelihood - in this case the probability of obtaining the observed
summary statistics measured from the data - is proportional to the
number of simulated points that lie within some small distance of the
observed point. With this approximation it is then possible to apply all
standard likelihood-based techniques for inference, both frequentist and
Bayesian. This talk gives examples of the application of these techniques
to a variety of problems, and finishes by describing recent work in
which the ABC method can be used to detect loci under local selection.
Meet the speaker in Room 212 Cockins Hall at 4:30
p.m. Refreshments will be served.
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