We provide on-line computational routines for sample size and power in microarray studies.
Lee, M.-L. T. (2004). Analysis of Microarray Gene Expression Data, Kluwer Academic Publishers, ISBN 0-7923-7087-2.
RANK ANALYSIS OF
MICROARRAYS (RAM)
We provide
R codes used in Lee, Gray, Bjorkbacka, Freeman.(2005).
Generalized
Rank Tests for Replicated Microarray Data, Statistical Applications in Genetics and Molecular Biology, Vol. 4: No. 1,
Article 3. http://www.bepress.com/sagmb/vol4/iss1/art3
We provide SAS, R, and STATA codes for threshold regression as discussed in
Lee M-LT,
Whitmore GA (2006),
Threshold regression for survival analysis:
Modeling event times by a stochastic process.
Statistical Science, 21: 501-513
Generalized Rank Based Tests for Clustered Data
From this link you will find SAS codes for generalized ranksum tests for clustered data as discussed in the following 3 articles:
Rosner B,
Glynn RJ, Lee, M-LT,
Incorporating of clustering effects for the Wilcoxon rank sum test: a large
sample approach. Biometrics, 2003, 59: 1089-1098.
Rosner B,
Glynn RJ, Lee, M-LT,
The Wilcoxon signed rank test for paired comparisons of clustered data. Biometrics, 2006; 62: 185-192.
Rosner B,
Glynn RJ, Lee, M-LT,
Extension of the Rank Sum Test for Clustered Data: two group comparisons with group membership defined at the subunit level. Biometrics, 2006, 62: 1251-1259.