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Alexandridis R, Lin S, Irwin M. 2004. Class discovery and classification of tumor samples using mixture modeling of gene expression data - a unified approach. Bioinformatics. 20:2545-2552.

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Biswas S, Lin S. 2006. A Bayesian approach for incorporating variable rates of heterogeneity in linkage analysis. Journal of the American Statistical Association. 101:1341-1351.

Biswas S, Papachristou C, Irwin M, Lin S. 2003. Linkage analysis of the simulated data - evaluations and comparisons of methods. BMC Genetics. 4:S70.

Biswas S, Lin S, Berry DA. 2005. A new Bayesian Approach Incorporating Covariate Information for Heterogeneity and its comparison with HLOD. BMC Genetics. 6:S138.

Biswas S, Lin S. 2007. Incorporating covariates in mapping heterogeneous traits - a hierarchical model using empirical Bayes estimation. Genetic Epidemiology. 31:684-696.

Biswas S, Papachristou C, Irwin M, Lin S. 2002. Linkage analysis of the simulated data-comparison of methods. Proceedings of the Genetic Analysis Workshop. 13:372-276.

Biswas S, Lin S. 2004. Evaluations of maximization procedures for estimating linkage parameters under heterogeneity. Genetic Epidemiology. 26:206-217.

Blower PE, Chung JH, Verducci J, Lin S, Park JK, Dai Z, Liu CG, Schmittgen TD, Reinhold WC, Croce CM et al.. 2008. MicroRNAs Moderate the Chemosensitivity of Tumor Cells. Molecular Cancer Therapeutics. 7(1):1-9.

Blower PE, Verducci J, Lin S, Zhou J, Chung J-H, Dai Z, Liu C-G, Reinhold W, Croce CM, Weinstein JN et al.. 2007. MicroRNA microarray expression data for the NCI-60 cancer cell panel. Molecular Cancer Therapeutics. 6:1483-1491.

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Cataland SR, Jin M, Lin S, Kraut EH, George JN, Wu HM. 2008. Effect of prophylactic cyclosporine therapy on ADAMTS13 biomarkers in patients with idiopathic thrombotic thrombocytopenicc purpura. American Journal of Hematology. 83:911-915.

Cataland S, Yang S, Witkoff L, Kraut E, Lin S, George J, Wu H. 2009. Demographic and ADAMTS13 Biomarker Data as Predictors of Early Recurrences of Idiopathic Thrombotic Thrombocytpenic Purpura. Haematology. 83:559-564.

Cataland SR, Jin M, Lin S, Kennedy MS, Kraut EH, George JN, Wu HM. 2007. A Prospective Study of Concurrent Cyclosporine and Plasma Exchange in Thrombotic Thrombocytopenic Purpura. British Journal of Haematology. 139:486-493.

Cheng R, Ma JZ, Wright FA, Lin S, Gao X, Wang D, Elston RC, Li MD. 2003. Nonparametric disequilibrium mapping of functional sites using haplotypes of multiple tightly linked single-nucleotide polymorphism (SNP) markers. Genetics. 164:1175-1187.

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Deatherage DE, Potter D, Yan P, Huang TH-M, Lin S. 2009. Methylation analysis by microarray.

Ding J, Lin S, Liu Y. 2006. A Monte Carlo pedigree disequilibrium test for x-chromosome markers. American Journal of Human Genetics. 79:567-573.

Ding J, Lin S. 2008. XMCPDT does have correct type I error rates. American Journal of Human Genetics. 82:528-530.

Ding J, Lin S. Submitted. XMCPDT does have correct type I error rates. American Journal of Human Genetics.

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Guo W, Liang C-Y, Lin S. 2009. Haplotype association analysis of NARAC data using rGLM. BMC Proceedings. 3,S32

Guo W, Lin S. 2009. Generalized Linear Modeling with Regularization for Detecting Common Disease Rare Haplotype Association. Genetic Epidemiology. 33:3086.

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Hsu JC, Rogers JA, Lin S. 2004. Using the partitioning principle to construct confidence sets for the location of a disease gene. Journal of Statistical Planning and Inference. 125:101-118.

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Jin M, Casper TC, Cataland SR, Rikabi NR, Lin S, Li YJ, Wu HM. 2008. Relationship between ADAMTS13 activity in clinical remission and the risk of TTP relapse. British Journal of Haematology. 141:651-658.

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Khalili A, Huang T, Lin S. 2009. A Robust Unified Approach to Analyzing methy-lation and Gene Expression Data. Computational Statistics and Data Analysis. 53:1701-1710.

Khalili A, Potter D, Yan P, Li L, Gray J, Huang T, Lin S. 2007. Gamma-Normal-Gamma Mixture Model for Detecting Differentially Methylated Loci in Three Breast Cancer Cell Lines. Cancer Informatics. 2:43-54.

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Licht B, Licht M, Harper K, Lin S, Curtin J, Hyson, L WK. 2002. Clinical presentations of naturally occurring canine seizures: similarities to human seizures. Epilepsy and Behavior. 3:460-470.

Licht BG, Lin S, Luo Y, Hyson L, Licht M, Harper K, Sullivan S, Fernandez S, Johnson E. 2007. Familial Focal Epilepsy in Standard Poodles: Clinical Characteristics andMode of Inheritance. Journal of the American Veterinary Medical Association. 231:1520-1528.

Lin S, Zhou H. 2009. Handbook on Analyzing Human Genetics Data: Computational approaches and software.

Lin S. 2010. Rank Aggregation methods. WIRES: Computational Statistics. 2

Lin S, Cheng R, Wright F. 2001. Genetic crossover interference in the human genome. Annals of Human Genetics. 65:79-93.

Lin S. 2007. Mixture Modeling of Progression Pathways of Heterogeneous Breast Tumors. Journal of Theoretical Biology. 249:254-261.

Lin S. 2000. Monte Carlo methods for linkage analysis of two-locus disease models. Annals of Human Genetics. 64:519-532.

Lin S, Rogers JA, Hsu JC. 2001. A confidence-set approach for finding tightly linked genomic regions. American Journal of Human Genetics. 68:1219-1228.

Lin S, Ding J, Dong C, Liu Z, Ma ZJ, Wan S, Xu Y. 2005. Comparisons of methods for linkage analysis and haplotype reconstruction using extended pedigree data. BMC Genetics. 6:S76.

Lin S. 2002. Construction of a confidence set of markers for the location of a disease gene using affected-sib-pair data. Human Heredity. 53:103-112.

Lin S, Alexandridis R. 2002. Classification of tissue samples using mixture modeling of microarray gene expression data. IMS Lecture Notes Volume.

Lin S, Biswas S. 2004. On modelling locus heterogeneity using mixture distributions. BMC Genetics. 5:29.

Lin S. 2001. Sample size requirement for detecting interference under the chi-square model. Human Heredity. 52:201-209.

Lin S, Skrivanek Z, Irwin M. 2003. Haplotyping using SIMPLE - caution on ignoring interference. Genetic Epidemiology. 25:384-387.

Liu Z, Lin S, Tan M. 2006. Genome-wide tagging SNPs with entropy-based Monte Carlo methods. Journal of Computational Biology. 13:1606-1614.

Liu Z, Lin S, Tan M. 2010. Sparse Support Vector Machines with Lp Penalty for Improved Biomarket Identification. IEEE/ACM Transactions on Computational Biology and Bioinformatics. 7:100-107.

Liu Z, Lin S. 2006. Classification Using Mass Spectrometry Proteomic Data with Kernel-Based Algorithms. Engineering Letters. 13:3.

Liu Z, Lin S. 2005. Multilocus LD Measure and Tag SNP Selection with Generalized Mutual Information. Genetic Epidemiology. 29:353-364.

Luo Y, Lin S. 2003. Information gain for genetic parameter estimation with incorporation of maker data. Biometrics. 59:393-401.

Luo Y, Lin S. 2003. Finding starting points for Markov chain Monte Carlo analysis of genetic data from large and complex pedigrees. Genetic Epidemiology. 25:14-24.

Luo Y, Lin S, Irwin M. 2001. Two-locus modeling of asthma in a Hutterite pedigree via Markov Chain Monte Carlo. Genetic Epidemiology. 21:S24-S29.

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Papachristou C, Lin S. 2006. A Two-Step Procedure for Constructing Confidence Intervals of Trait Loci with Application to a Rheumatoid Arthritis Dataset. Genetic Epidemiology. 30:18-29.

Papachristou C, Lin S. 2005. Interval Estimation of Disease Loci - Development and Applications. BMC Genetics. 6:S21.

Papachristou C, Lin S. 2005. A confidence set inference procedure for gene mapping using markers with incomplete polymorphism. Human Heredity. 59:1-13.

Papachristou C, Lin S. 2006. A comparison of methods for intermediate fine mapping. Genetic Epidemiology. 30:677-689.

Papachristou C, Lin S. 2006. Microsatellites Versus Single-Nucleotide Polymorphisms in Confidence Interval Estimation of Disease Loci. Genetic Epidemiology. 30:3-17.

Papachristou B, Abney M, Lin S. 2007. Confidence intervals of QTLs - development and application of new linkage methods. BMC Proceedings. 1:S91.